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can a db that is already the target of trans replication also be the target of custom made etl?

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hi we run 2017 std.

Due to a lack of pk's on some publisher tables, we may need to roll our own "replication" to a target db via etl.

the best scenario would be for us to put those tables on db's whose tables with pk's already subscribe to sql server replication.  Is that doable?  Is it possible that best practice says not to do this? 


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